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	<title>Agrobacterium mediated gene transfer Archives - Online Biology Notes</title>
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		<title>Plants transformation methods and applications</title>
		<link>https://www.onlinebiologynotes.com/plants-transformation-methods-and-applications/</link>
		
		<dc:creator><![CDATA[Gaurab Karki]]></dc:creator>
		<pubDate>Mon, 07 Dec 2020 14:44:54 +0000</pubDate>
				<category><![CDATA[Agricultural Microbiology]]></category>
		<category><![CDATA[Agrobacterium mediated gene transfer]]></category>
		<category><![CDATA[Plants transformation methods and applications]]></category>
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					<description><![CDATA[<p>What is Plant transformation? Genetic transformation: The term genetic transformation is defined as the directed desirable transfer of gene from one organism to another along <a class="mh-excerpt-more" href="https://www.onlinebiologynotes.com/plants-transformation-methods-and-applications/" title="Plants transformation methods and applications">[...]</a></p>
<p>The post <a href="https://www.onlinebiologynotes.com/plants-transformation-methods-and-applications/">Plants transformation methods and applications</a> appeared first on <a href="https://www.onlinebiologynotes.com">Online Biology Notes</a>.</p>
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<h2 class="wp-block-heading">What is <strong>Plant transformation</strong>?</h2>



<ul class="wp-block-list"><li><strong>Genetic transformation:</strong> The term genetic transformation is defined as the directed desirable transfer of gene from one organism to another along with the subsequent stable integration and expression of a foreign gene in the genome.</li><li>The gene that is transferred is termed as<strong><em> ‘transgene’ </em></strong>and the organisms that are formed after a successful gene transfer are termed as <strong>‘transgenics’.</strong></li><li><strong>Plant transformation</strong>: It is defined as the method of insertion of the DNA from other organism, usually a plant into the genome of the plant of interest.</li></ul>



<h2 class="wp-block-heading"><strong>W</strong>hy do we use plant transformation technology? </h2>



<ol class="wp-block-list"><li><strong>To develop variety that are resistance to pests:</strong><ul><li>It is now possible to introduce foreign genes that impart resistance to insects into the plant genome with the advent of genetic engineering techniques based on recombinant DNA technology.</li><li>Combined with plant tissue culture, recombinant DNA technology has helped to develop innovative methods for the economic management of various types of biotic stresses, including insect pests.</li><li>In reducing the losses incurred by biotic stresses, including insect pests, such innovations will be of tremendous benefit.</li><li>Transgenic plants that display insecticidal Bt proteins alone or in combination with herbicide resistance proteins are revolutionizing agriculture.</li></ul></li><li><strong>For Quality enhancement of the plant variety:</strong><ul><li>In improving plant productivity and improving the quality of plant products, plant transformations/transgenics have tremendous utility.</li><li>Improvements may be related to improving the nutritional value of the plant or to improving the functional properties of the production or consumption process.</li><li>In order to block the development of certain metabolites, transgenic plants can be used by regulating the over-expression or inhibition (antisense expression) of some of the essential enzymes as shown.</li></ul></li></ol>



<h3 class="wp-block-heading"><strong>What are the biological requirements for plant transformation?</strong></h3>



<ul class="wp-block-list"><li>For the gene transfer to produce transgenic plant, the biological requirements are listed below:</li><li>There must be a target tissue that consists of competent cells for plant regeneration.</li><li>A technique for the introduction of DNA into these regenerable cells.</li><li>A procedure for the selection and regeneration of transformed plants at an optimum frequency.</li></ul>



<h3 class="wp-block-heading"><strong>What are the physical requirements for plant transformation?</strong></h3>



<ul class="wp-block-list"><li>Highly efficient, economic, reproducible, and should readily produce several transformants for testing.</li><li>Should be safe for operators.</li><li>Should be simple technically including a minimum of demanding or inherently variable manipulations, like protoplast production and regeneration.</li><li>Tissue culture should be completed in minimum time as to reduce the related costs and to avoid unnecessary somaclonal variation.</li><li>Stable, if vegetatively propagated then uniform transformants and if sexually propagated species then, fertile germline transformants.</li><li>Integration patterns should be simple and the introduced genes should have low copy number, so as to reduce the probability of undesired gene disruption at insertion sites.</li></ul>



<h2 class="wp-block-heading"><strong>Plant transformation methods:</strong></h2>



<figure class="wp-block-table"><table class="has-fixed-layout"><tbody><tr><td class="has-text-align-left" data-align="left"><strong>Direct method of gene transfer (Non-biological based transformation)</strong></td><td class="has-text-align-left" data-align="left"><strong>Indirect method of gene transfer</strong></td></tr><tr><td class="has-text-align-left" data-align="left"><strong>Physical </strong><br>Microinjection<br>Biolistics-gene gun/particle bombardment<br>Electroporation<br>Silica/carbon fibers<br>Laser mediated<br>SAT<br><strong>Chemical</strong><br>PEGDEAE-dextran<br>Calcium phosphate<br>Artificial lipids<br>Proteins<br>Dendrimers <strong> </strong></td><td class="has-text-align-left" data-align="left"><strong>Biological</strong><br><br><strong>Agrobacterium mediated</strong> <strong>Basically done by two methods:</strong> Co-cultivation with the explants tissue<br>In planta transformation <br><br><strong>Virus mediated</strong> <strong><em> </em></strong></td></tr></tbody></table></figure>



<h3 class="wp-block-heading"><strong>Physical gene transfer methods:</strong></h3>



<ol class="wp-block-list"><li><strong>Electroporation:</strong><ul><li>In this method, electric pulse of high field strength is used inorder to form pores in the cell membrane.</li><li>If DNA is present at an appropriate concentration in the buffer solution, it will be taken up via these pores.</li><li>Plant materials is incubated in a buffer solution that contains DNA and exposed to high voltage electric pulse.</li><li>Plant materials is incubated in a buffer solution that contains DNA and exposed to intense electric pulse.</li><li>Plant materials is incubated in a buffer solution that contains DNA and exposed to intense electric pulse.</li><li><strong>Advantages:</strong><ul><li>It is possible to transform both intact cells and tissue.</li><li>The transformation efficiency depends on the materials of the plant.</li></ul></li><li><strong>Disadvantages:</strong><ul><li>DNA is obtained by 40 to 50 percent of incubated cells.</li><li>Near to 50 percent of the cells transformed will survive.</li></ul></li></ul></li><li><strong>Biolistic gene gun / particle bombardment:</strong><ul><li>It is also termed as microprojectile bombardment.</li><li>To deliver DNA into cells, foreign DNA is coated with high-velocity gold or tungsten particles.</li><li>This method is popularly being used for its ability to transfer foreign DNA into the mammalian cells and microorganisms.</li><li><strong>Advantages:</strong><ul><li>All plant species can be transformed using this process.</li><li>All plant species can be transformed using this process.</li><li>The protocol for transformation is relatively simple.</li></ul></li><li><strong>Disadvantages:</strong><ul><li>Difficulty in acquiring single copy transgenic events.</li><li>High costs for microcarriers and supplies.</li><li>Intracellular target is irregular or random (cytoplasm, vacuole, nucleus, plasmid etc.)</li><li>Transfer DNA is not protected.</li></ul></li></ul></li><li><strong>Microinjection method:</strong><ul><li>A direct physical approach involving the mechanical introduction of the desirable DNA into a target cell is microinjection.</li><li>The microinjection technique involves transferring the gene into the cytoplasm or nucleus of a plant cell or protoplast through a micropipette.</li><li>The most important application of this is the introduction of DNA into animal oocytes and embryos, either in the study of transient expression or in the generation of transgenic animals.</li><li>The key disadvantages of microinjection are that it is long, costly and needs to be carried out by trained and certified workers.</li><li><strong>Advantages:</strong><ul><li>This method does not need protoplast.</li><li>The device is easy and inexpensive.</li><li>Methods may be helpful for the transfer of genes into cereals that do not easily regenerate from cultured cells.</li><li>Technically straightforward.</li></ul></li><li><strong>Limitations:</strong><ul><li>Less specific</li><li>Less efficient</li><li>The transformation frequency is low.</li></ul></li></ul></li><li><strong>Liposome mediated transformation:</strong><ul><li>Liposome-mediated transformation includes liposome adhesion to the surface of the protoplast, its fusion at the attachment site, and the release of plasmids inside the cell.</li><li>Liposomes are lipid spheres that are used to bring molecules into cells.</li><li>These are artificial vesicles that can behave as delivery vehicles for exogenous materials including transgenes.</li><li>They are regarded as sphere of lipid bilayers encircling the molecule to be transported and encourage transport after fusing with the cell membrane.</li><li>Cationic lipids are those with a positive charge that are used for nucleic acid transfer.</li><li>Liposomes can interact more readily with the negatively charged cell membrane than uncharged liposomes.</li><li>Fusion between the cationic liposome and the cell surface results in the transmission of DNA directly through the plasma membrane.</li><li><strong>Advantages:</strong><ul><li>High reproducibility degree.</li><li>Stability for the long term.</li><li>Low toxicity level.</li><li>Nucleic acid protection from degradation</li></ul></li></ul></li></ol>



<h3 class="wp-block-heading"><strong>Chemical mediated gene transfer methods:</strong></h3>



<ol class="wp-block-list"><li><strong>PEG mediated gene transfer:</strong><ul><li>Polyethylene glycol (PEG) disrupts the plasma membrane of protoplasts in the presence of divalent cations (using Ca2+) and makes it permeable to naked DNA.</li><li>Polyethylene glycol (PEG) disrupts the plasma membrane of protoplasts in the presence of divalent cations (using Ca2+) and makes it permeable to naked DNA.</li><li>The protoplastic culture is taken into a tube and 40 percent PEG 4000 (w/v) dissolved in mannitol is added to this tube and calcium nitrate is added slowly and incubated for a few minutes.</li><li><strong>Advantages:</strong><ul><li>A large number of protoplasts can be transformed concurrently.</li><li>A wide variety of plant species can be used successfully.</li><li><strong>Limitations:</strong></li><li>The DNA is prone to rearrangement and degradation.</li><li>Random integration of foreign DNA into genome may lead to unfavorable characteristics.</li><li>A challenging task is the regeneration of plants from converted protoplasts.</li></ul></li></ul></li><li><strong>Calcium phosphate co-precipitation:</strong><ol><li>The DNA is permitted to mix with calcium chloride solution and isotonic phosphate buffer to form DNA-calcium phosphate precipitate.</li><li>The cells are transformed when the actively dividing cells in the culture are exposed to this precipitate for several hours.</li><li>The efficacy of this technique depends on the high DNA concentration and the protection of the complex precipitate.</li><li>The addition of dimethyl sulfoxide (DMSO) enhances transformation efficiency.</li></ol></li><li><strong>DEAE-dextran mediated transfer:</strong><ol><li>With a high molecular weight polymer diethyl amino ethyl(DEAE)dextran, the desirable DNA can be complexed and transferred.</li><li>This approach&#8217;s main drawback is that it does not generate stable transformants.</li></ol></li></ol>



<h3 class="wp-block-heading"><strong>Biological method of gene transfer:</strong></h3>



<h3 class="wp-block-heading"><strong><em>Agrobacterium</em>-mediated gene transfer in Plants:</strong></h3>



<ul class="wp-block-list"><li><em>Agrobacterium tumefaciens </em>is a widely occurring soil bacterium that is responsible for causing crown gall, and has the capability to integrate new genetic material into the plant cell.</li><li>T DNA is a term given for the genetic material that is situated on a Ti plasmid.</li><li>A Ti plasmid is a common circular fragment of DNA found in almost all bacteria.</li><li>Agrobacterium-mediated transformation is highly efficient and hence is most usually used method for plant genetic engineering.</li><li>In the course of transformation, various components of Ti plasmid plays a role in effective transfer of the gene of interest into the plant cells. They are:</li><li>T-DNA border sequences that are responsible for demarcating the T-DNA to be transferred to the plant genome.</li><li>vir genes that are necessary for the transfer of T-DNA region to the plant but they cannot be transferred by themselves.</li><li>Modified T-DNA region where the genes that are responsible for the formation of crown gall are eliminated and replaced with genes of interest.</li></ul>



<h3 class="wp-block-heading"><strong>Steps for<em> Agrobacterium</em></strong><strong>-mediated Plant Transformation Process:</strong></h3>



<ul class="wp-block-list"><li>The <em>Agrobacterium</em>-mediated transformation process comprises of several steps. They are:</li><li>Isolation of the gene of interest from the source organism.</li><li>Development of a functional transgenic hybrid involving the gene of interest, promoters to drive expression; codon modification, if required to enhance successful protein production; and marker genes to favor tracking of the introduced genes in the host plant.</li><li>&nbsp;Insertion of the transgene into the Ti-plasmid.</li><li>&nbsp;Integration of the T-DNA-containing-plasmid into&nbsp;<em>Agrobacterium</em>.</li><li>The transformed&nbsp;<em>Agrobacterium</em>&nbsp;is mixed with plant cells to permit transfer of T-DNA into plant chromosome.</li><li>Regeneration of the new plantlets that are genetically modified.</li><li>Examination for characteristic performance or expression of transgene at lab, greenhouse and field level.&nbsp;</li></ul>
<p>The post <a href="https://www.onlinebiologynotes.com/plants-transformation-methods-and-applications/">Plants transformation methods and applications</a> appeared first on <a href="https://www.onlinebiologynotes.com">Online Biology Notes</a>.</p>
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